Repository revision
repository tip
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository chira_quantify
Name: chira_quantify
Owner: iuc
Synopsis: Wrapper for ChiRA: ChiRA qauntify
ChiRA is a set of tools to analyze RNA-RNA interactome experimental data such as CLASH, CLEAR-CLIP, PARIS, LIGR-Seq etc.
Following are the descriptions of the each tool. Here we provide descriptions about the input and ouptput files.
For the detailed description of the other parameters please look at the help texts of tools.
Content homepage: https://github.com/pavanvidem/chira
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/chira
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/chira_quantify/38d2b1f38992
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/chira_quantify
Type: unrestricted
Revision: 18:38d2b1f38992
This revision can be installed: True
Times cloned / installed: 508

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
quantify aligned loci to score the alignments 1.4.30 16.01

Categories
RNA - Utilities for RNA
Transcriptomics - Tools for use in the study of Transcriptomics.
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis