Repository revision
repository tip
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository pileup_interval
Owner: devteam
Synopsis: Pileup-to-Interval condenses pileup format into ranges of bases
Reduces the size of a results set by taking a pileup file and producing
a condensed version showing consecutive sequences of bases meeting coverage criteria.
The tool works on six and ten column pileup formats produced with *samtools pileup*
command. You also can specify columns for the input file manually. The tool assumes
that the pileup dataset was produced by *samtools pileup* command (although you
can override this by setting column assignments manually).
Type: unrestricted
Revision: 4:9c1c0b947e46
This revision can be installed: True
Times cloned / installed: 4283

Contents of this repository

Name Description Version Minimum Galaxy Version
condenses pileup format into ranges of bases 1.0.3 16.01

SAM - Tools for manipulating alignments in the SAM format