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Repository scanpy_run_fdg
Owner: ebi-gxa
Synopsis: Wrapper for the scanpy-scripts tool suite: Scanpy RunFDG
Scanpy is a scalable toolkit for analyzing single-cell gene expression data.  It includes
preprocessing, visualization, clustering, pseudotime and trajectory inference and differential
expression testing. Scanpy-scripts provides a set of command-line wrapper scripts that are
composed from Scanpy API for easy execution of common analysis.
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Type: unrestricted
Revision: 5:f5bc7d1b32fd
This revision can be installed: True
Times cloned / installed: 837

Contents of this repository

Name Description Version Minimum Galaxy Version
visualise cell clusters using force-directed graph 1.4.3+galaxy6 16.01

Transcriptomics - Tools for use in the study of Transcriptomics.
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis
RNA - Utilities for RNA