Repository revision
repository tip
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository khmer_count_median
Owner: iuc
Synopsis: Wrapper for khmer tool: khmer: Count Median
khmer is a library and suite of command line tools for working with DNA
sequence. It is primarily aimed at short-read sequencing data such as that
produced by the Illumina platform. khmer takes a k-mer-centric approach to
sequence analysis, hence the name.

The official repository is at
and you can read the docs online here:

There are two mailing lists dedicated to khmer, an announcements-only list
and a discussion list. To search their archives and sign-up for them, please
visit the following URLs:

Content homepage:
Type: unrestricted
Revision: 9:b3d513c7093e
This revision can be installed: True
Times cloned / installed: 553

Contents of this repository

Name Description Version Minimum Galaxy Version
Count the median/avg k-mer abundance for each sequence 3.0.0a3+galaxy2 20.01

Assembly - Tools for working with assemblies
Next Gen Mappers - Tools for the analysis and handling of Next Gen sequencing data