| Wrapper for Mugsy, a multiple whole genome aligner. Mugsy uses Nucmer for pairwise alignment, a custom graph based segmentation procedure for identifying collinear regions, and the segment-based progressive multiple alignment strategy from Seqan::TCoffee. Mugsy accepts draft genomes in the form of multi-FASTA files and does not require a reference genome. |
hg clone https://toolshed.g2.bx.psu.edu/repos/crs4/mugsy
| Repository package_bzlib_1_0 revision af4887e1f595 owned by iuc (prior install required) |
| Name | Version | Type | |
|---|---|---|---|
| boost | 1.53.0 | package | |
| mugsy | 1.2.3.1 | package | |
| Name | Description | Version | Minimum Galaxy Version |
|---|---|---|---|
| multiple whole genome aligner | 1.0.1 | any | |