Repository revision
repository tip
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository gsc_cpm_tpm_rpk
Name: gsc_cpm_tpm_rpk
Owner: artbio
Synopsis: Generate CPM,TPM or RPK from raw counts
Normalizes raw counts expression matrix on different parameters.
- CPM : library-size normalization
- TPM : gene length and library-size normalization
- RPK : gene length normalization
This tools derives from the non-longer supported artbio tool cpm_tpm_rpk
Content homepage: http://artbio.fr
Development repository: https://github.com/ARTbio/tools-artbio/tree/master/tools/gsc_cpm_tpm_rpk
Link to this repository: https://toolshed.g2.bx.psu.edu/view/artbio/gsc_cpm_tpm_rpk/46507a10106c
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/artbio/gsc_cpm_tpm_rpk
Type: unrestricted
Revision: 1:46507a10106c
This revision can be installed: True
Times cloned / installed: 117

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
from raw counts expression values 0.9.1 16.01

Categories
Transcriptomics - Tools for use in the study of Transcriptomics.