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Repository annotation_profiler

Name: annotation_profiler

Owner: devteam

Synopsis: Profile Annotations for a set of genomic intervals

Detailed description:

Takes an input set of intervals and for each interval determines
the base coverage of the interval by a set of features (tables) available from UCSC.
Genomic regions from the input feature data have been merged by overlap / direct
adjacency (e.g. a table having ranges of: 1-10, 6-12, 12-20 and 25-28 results in
two merged ranges of: 1-20 and 25-28).

Development repository: https://github.com/galaxyproject/tools-devteam/tree/master/tools/annotation_profiler

Link to this repository: https://toolshed.g2.bx.psu.edu/view/devteam/annotation_profiler/3b33da018e74

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/annotation_profiler

Type: unrestricted

Revision: 0:3b33da018e74

This revision can be installed: True

Times cloned / installed: 2988