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Repository staramr
Name: staramr
Owner: iuc
Synopsis: Scan genome contigs against the ResFinder, PlasmidFinder, and PointFinder antimicrobial resistance databases.
staramr - Scans genome contigs (in FASTA format) against the ResFinder, PlasmidFinder, and PointFinder databases to search for antimicrobial resistance genomes. Makes predictions of the drugs these genes give resistance to.
Content homepage: https://github.com/phac-nml/staramr
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/staramr
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/staramr/9e8cf8dd6955
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/staramr
Type: unrestricted
Revision: 1:9e8cf8dd6955
This revision can be installed: True
Times cloned / installed: 90

Contents of this repository

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Name Description Version Minimum Galaxy Version
Scans genome assemblies against the ResFinder, PlasmidFinder, and PointFinder databases searching for AMR genes 0.11.0+galaxy0 22.05

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis