Repository fastaptamer_count
Name: fastaptamer_count
Owner: fastaptamer
Synopsis: Count, rank, sort and normalize sequence reads in a selection population.
FASTAptamer-Count serves as the gateway to the FASTAptamer suite of bioinformatics tools for combinatorial selections (aptamers, (deoxy)ribozymes, phage display, direct mutagenesis, etc.). For a given FASTQ input file, FASTAptamer-Count will determine the number of times each sequence was read, normalize sequence frequency to reads per million, and rank and sort sequences by decreasing total reads.
Link to this repository: https://toolshed.g2.bx.psu.edu/view/fastaptamer/fastaptamer_count/b9b2da3fa7d7
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/fastaptamer/fastaptamer_count
Type: unrestricted
Revision: 1:b9b2da3fa7d7
This revision can be installed: True
Times cloned / installed: 358

Contents of this repository

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Name Description Version Minimum Galaxy Version
Count, rank, sort and normalize sequence reads in a selection population. 1.0.2 any

Categories
Combinatorial Selections - Tools for combinatorial selection