Repository package_minced_0_1_6
Name: package_minced_0_1_6
Owner: takadonet
Synopsis: Contains a tool dependency definition that downloads version 0.1.6 of minced, a CRISPR finder.

MinCED is a program to find Clustered Regularly Interspaced Short Palindromic
Repeats (CRISPRs) in full genomes or environmental datasets such as metagenomes,
in which sequence size can be anywhere from 100 to 800 bp. MinCED runs from the
command-line and was derived from CRT (http://www.room220.com/crt/):
  Charles Bland et al., CRISPR Recognition Tool (CRT): a tool for automatic
  detection of clustered regularly interspaced palindromic repeats, BMC
  Bioinformatics 8, no. 1 (2007): 209.

Repository-Maintainer: Philip Mabon
Link to this repository: https://toolshed.g2.bx.psu.edu/view/takadonet/package_minced_0_1_6/a135862cd007
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/takadonet/package_minced_0_1_6
Type: tool_dependency_definition
Revision: 0:a135862cd007
This revision can be installed: True
Times cloned / installed: 576
Dependencies of this repository

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
minced 0.1.6 package

Categories
Tool Dependency Packages - Repositories that contain third-party tool dependency package installation definitions