Repository methylkit
Name: methylkit
Owner: rnateam
Synopsis: A method for DNA methylation analysis and annotation from high-throughput bisulfite sequencing.
methylKit is an R package for DNA methylation analysis and annotation
from high-throughput bisulfite sequencing. The package is designed to deal with
sequencing data from RRBS and its variants, but also target-capture methods and
whole genome bisulfite sequencing. It also has functions to analyze base-pair
resolution 5hmC data from experimental protocols such as oxBS-Seq and TAB-Seq.
Perl is needed to read SAM files only.
Type: unrestricted
Revision: 0:a8705df7c57f
This revision can be installed: True
Times cloned / installed: 465

Contents of this repository

Name Description Version Minimum Galaxy Version
DNA methylation analysis and annotation 0.99.2 any

Categories
Epigenetics - Tools for analyzing Epigenetic/Epigenomic datasets