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Repository cufflinks
Name: cufflinks
Owner: devteam
Synopsis: Galaxy wrappers for the Cufflinks tool.
Cufflinks assembles transcripts, estimates their abundances, and
tests for differential expression and regulation in RNA-Seq samples. It accepts
aligned RNA-Seq reads and assembles the alignments into a parsimonious set of transcripts.
Cufflinks then estimates the relative abundances of these transcripts based on how
many reads support each one.
Type: unrestricted
Revision: 12:d080005cffe1
This revision can be installed: True
Times cloned / installed: 7443

Contents of this repository

Name Description Version Minimum Galaxy Version
transcript assembly and FPKM (RPKM) estimates for RNA-Seq data 2.2.1.3 16.01

Categories
Transcriptomics - Tools for use in the study of Transcriptomics.