This repository has been marked as deprecated, so some tool shed features may be restricted.
Repository mimodd_deletion_prediction
Name: mimodd_deletion_prediction
Owner: wolma
Synopsis: use MiModD to predict deletions in one or more samples of aligned paired-end reads
install this tool from the suite_mimodd_0_1_3 repository
Link to this repository: https://toolshed.g2.bx.psu.edu/view/wolma/mimodd_deletion_prediction/2c86155476e4
Type: unrestricted
Revision: 1:2c86155476e4
This revision can be installed: True
Times cloned / installed: 4
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_zlib_1_2_8 revision dce22a65bac2 owned by wolma (prior install required)
Repository package_python3_zlib_dependent_1_0 revision 34b2ffc538de owned by wolma (prior install required)
Repository package_zlib_1_2_8 revision 411985b46ae8 owned by iuc (prior install required)
Repository package_sqlite_3_8_3 revision c8a5c11cc921 owned by iuc (prior install required)

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
mimodd 0.1.5 package

Contents of this repository

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Name Description Version Minimum Galaxy Version
Predicts deletions in one or more aligned read samples based on coverage of the reference genome and on insert sizes 1.0.0 any

Categories
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA