Galaxy |

Repository ete

Name: ete

Owner: earlhaminst

Synopsis: Analyse phylogenetic trees using the ETE Toolkit

Detailed description:

Generate a species tree from a list of species using the ETE Toolkit

Content homepage: http://etetoolkit.org/

Development repository: https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete

Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/earlhaminst/ete/541a2ffc01ff

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/earlhaminst/ete

Type: unrestricted

Revision: 10:541a2ffc01ff

This revision can be installed: True

Times cloned / installed: 638

Contents of this repository

Name	Description	Version	Minimum Galaxy Version
Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
ETE lineage generator View tool metadata	from a list of species/taxids using the ETE Toolkit	3.1.2	16.01
ETE species tree generator View tool metadata	from a list of species using the ETE Toolkit	3.1.2	16.01
ETE GeneTree splitter View tool metadata	from a genetree using the ETE Toolkit	3.1.2	16.01
Homology Classifier and Filter View tool metadata	from a genetree using the ETE Toolkit	3.1.2	16.01
Gene Copy Number Finder View tool metadata	from a genetree using the ETE Toolkit	3.1.2	16.01
ETE taxa DB generator View tool metadata	generates the ETE sqlite DB from the NCBI taxdump.tar.gz	3.1.2	16.01
ETE mod View tool metadata	manipulates tree topology by rooting, pruning or sorting branches	3.1.2	16.01