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Repository snpeff
Name: snpeff
Owner: pcingola
Synopsis: Calculate and annotate variants (SNPs, MNPs and InDels).
See details here http://snpeff.sourceforge.net/
Link to this repository: https://toolshed.g2.bx.psu.edu/view/pcingola/snpeff/c052639fa666
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/pcingola/snpeff
Type: unrestricted
Revision: 3:c052639fa666
This revision can be installed: True
Times cloned / installed: 1166

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Count samples are in 'case' and 'control' groups. 1.0 any
Filter variants using arbitrary expressions 1.0 any
Variant efefct and annotation 1.0 any
Filter variants using intervals 1.0 any
Annotate SNPs from dbSnp 1.0 any
Download a new database 1.0 any

Categories
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA