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Repository samtools_stats

Name: samtools_stats

Owner: devteam

Synopsis: Generate statistics for a BAM or SAM file

Detailed description:

This tool runs the samtools stats command in the SAMtools toolkit,
collecting statistics from BAM files. The output can be visualized using plot-bamstats.

Content homepage: http://www.htslib.org/

Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats

Link to this repository: https://toolshed.g2.bx.psu.edu/view/devteam/samtools_stats/541082d03bef

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/samtools_stats

Type: unrestricted

Revision: 12:541082d03bef

This revision can be installed: True

Times cloned / installed: 14733

Contents of this repository

Name	Description	Version	Minimum Galaxy Version
Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Samtools stats View tool metadata	generate statistics for BAM dataset	2.0.5	22.05