Repository revision
repository tip
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository targetfinder
Name: targetfinder
Owner: rnateam
Synopsis: Plant small RNA target prediction tool
TargetFinder will computationally predict small RNA binding sites on target transcripts from a sequence database.
This is done by aligning the input small RNA sequence against all transcripts,
followed by site scoring using a position-weighted scoring matrix.
Content homepage: https://github.com/carringtonlab/TargetFinder.git
Development repository: https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/
Link to this repository: https://toolshed.g2.bx.psu.edu/view/rnateam/targetfinder/c9d56748fbde
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/rnateam/targetfinder
Type: unrestricted
Revision: 1:c9d56748fbde
This revision can be installed: True
Times cloned / installed: 1524

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
plant small RNA target prediction tool 1.7.0+galaxy1 20.01

Categories
RNA - Utilities for RNA