Repository miniasm
Name: miniasm
Synopsis: Miniasm - Ultrafast de novo assembly for long noisy reads (though having no consensus step)
Miniasm is a very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format. Different from mainstream assemblers, miniasm does not have a consensus step. It simply concatenates pieces of read sequences to generate the final unitig sequences. Thus the per-base error rate is similar to the raw input reads.
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Type: unrestricted
Revision: 1:f0a2f5a9b637
This revision can be installed: True
Times cloned / installed: 105

Contents of this repository

Name Description Version Minimum Galaxy Version
Ultrafast de novo assembly for long noisy reads 0.2.0 16.01

Assembly - Tools for working with assemblies