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Repository ct_get_tool_pvals
Name: ct_get_tool_pvals
Owner: ebi-gxa
Synopsis: Wrapper for the cell-types-analysis tool suite: Cell types - get tool p-values
A suite of scripts for analysis of scRNA-seq cell type classification tool outputs. These scripts can be used both for evaluating the existing methods by running pipelines on labelled data and for analysing predicted labels for novel data sets.
Development repository: https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/
Link to this repository: https://toolshed.g2.bx.psu.edu/view/ebi-gxa/ct_get_tool_pvals/52df56743cd9
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/ebi-gxa/ct_get_tool_pvals
Type: unrestricted
Revision: 5:52df56743cd9
This revision can be installed: True
Times cloned / installed: 363

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Get p-values for tool performance metrics 1.1.1+galaxy0 18.01

Categories
Transcriptomics - Tools for use in the study of Transcriptomics.
RNA - Utilities for RNA
Statistics - Tools for generating statistics