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Repository nextclade
Name: nextclade
Owner: iuc
Synopsis: Nextclade tool: Nextclade
Nextclade is a tool that identifies differences between your sequences
and a reference sequence used by Nextstrain, uses these differences to
assign your sequences to clades, and reports potential sequence quality
issues in your data. You can use the tool to analyze sequences before
you upload them to a database, or if you want to assign Nextstrain
clades to a set of sequences.
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/nextclade
Type: unrestricted
Revision: 13:64be7ff9b97b
This revision can be installed: True
Times cloned / installed: 492

Contents of this repository

Name Description Version Minimum Galaxy Version
Viral genome clade assignment, mutation calling, and sequence quality checks 1.10.1+galaxy0 20.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis