Repository revision
repository tip
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository vcfbedintersect
Name: vcfbedintersect
Owner: devteam
Synopsis: Intersect VCF and BED datasets
Computes intersection between a VCF dataset and a set of genomic
intervals defined as either a BED dataset (http://genome.ucsc.edu/FAQ/FAQformat.html#format1)
or a manually typed interval (in the form of chr:start-end).
Content homepage: https://github.com/ekg/vcflib
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/vcflib/vcfbedintersect
Link to this repository: https://toolshed.g2.bx.psu.edu/view/devteam/vcfbedintersect/aea8e90ad788
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/vcfbedintersect
Type: unrestricted
Revision: 4:aea8e90ad788
This revision can be installed: True
Times cloned / installed: 3255

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Intersect VCF and BED datasets 1.0.0_rc3+galaxy0 16.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA