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Repository arriba
Name: arriba
Owner: iuc
Synopsis: Arriba (from the Arriba tool suite)
Arriba detects gene fusions from STAR aligned RNA-Seq data. 
It was developed for the use in a clinical research setting. 
Therefore, short runtimes and high sensitivity were important design criteria. 

Apart from gene fusions, Arriba can detect other structural rearrangements
with potential clinical relevance, such as viral integration sites,
internal tandem duplications, whole exon duplications,
truncations of genes (i.e., breakpoints in introns and intergenic regions).
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/arriba
Type: unrestricted
Revision: 0:a24ca22b906e
This revision can be installed: True
Times cloned / installed: 260

Contents of this repository

Name Description Version Minimum Galaxy Version
detect gene fusions from STAR aligned RNA-Seq data 2.3.0+galaxy0 20.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis
Transcriptomics - Tools for use in the study of Transcriptomics.