Repository pathoscope_id
Owner: jasper
Synopsis: Species identification and strain attribution with unassembled sequencing data
PathoScope takes next-generation sequencing reads from a mixture sample and predicts which genomes are present. We use a Bayesian framework combined with an initial reference-based alignment to assign reads to the correct genome of origin.
Type: unrestricted
Revision: 0:15f6593183bb
This revision can be installed: True
Times cloned / installed: 273

Contents of this repository

Name Description Version Minimum Galaxy Version
Pathoscope ID 0.1.0 any

Categories
Metagenomics - Tools enabling the study of metagenomes