Repository revision
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository medaka_variant_pipeline
Owner: iuc
Synopsis: Wrapper for medaka application: medaka variant pipeline
medaka is a tool to create a consensus sequence from nanopore sequencing data. 
This task is performed using neural networks applied from a pileup of individual 
sequencing reads against a draft assembly. It outperforms graph-based methods 
operating on basecalled data, and can be competitive with state-of-the-art 
signal-based methods, whilst being much faster.
Type: unrestricted
Revision: 1:92cdc29a8620
This revision can be installed: True
Times cloned / installed: 643

Contents of this repository

Name Description Version Minimum Galaxy Version
via neural networks 1.0.1+galaxy0 18.01

Sequence Analysis - Tools for performing Protein and DNA/RNA analysis