Repository kernel_principal_component_analysis
Name: kernel_principal_component_analysis
Owner: devteam
Synopsis: Kernel Principal Component Analysis
This tool uses functions from ''kernlab'' library from R statistical
package to perform Kernel Principal Component Analysis (kPCA) on the input data.
It outputs two files, one containing the summary statistics of the performed kPCA,
and the other containing a scatterplot matrix of rotated values reported by kPCA.
Development repository: https://github.com/galaxyproject/tools-devteam/tree/master/tools/kernel_principal_component_analysis
Link to this repository: https://toolshed.g2.bx.psu.edu/view/devteam/kernel_principal_component_analysis/3d58aa83e4a3
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/kernel_principal_component_analysis
Type: unrestricted
Revision: 1:3d58aa83e4a3
This revision can be installed: True
Times cloned / installed: 2620
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_r_2_11_0 revision 5824d2b3bc8b owned by devteam (prior install required)
Repository package_r_2_11_0 revision 5824d2b3bc8b owned by devteam (prior install required)
Repository package_r_2_11_0 revision 5824d2b3bc8b owned by devteam
Repository package_numpy_1_7 revision 0c288abd2a1e owned by devteam
Repository package_bx_python_0_7 revision 2d0c08728bca owned by devteam

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
R 2.11.0 package
bx-python 0.7.1 package
kernlab 0.1-4 package
numpy 1.7.1 package
rpy 1.0.3 package

Contents of this repository

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Name Description Version Minimum Galaxy Version
1.0.0 any