Repository revision
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository snippy
Name: snippy
Owner: iuc
Synopsis: Contains the snippy tool for characterising microbial snps
Snippy finds variants between a haploid reference genome and your NGS sequence reads. It will find both substitutions and insertions/deletions (indels).
Content homepage: https://github.com/tseemann/snippy
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/snippy
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/snippy/9bccc8404a3c
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/snippy
Type: unrestricted
Revision: 4:9bccc8404a3c
This revision can be installed: True
Times cloned / installed: 1366

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Combine multiple Snippy outputs into a core SNP alignment 4.3.6 16.01
Snippy finds SNPs between a haploid reference genome and your NGS sequence reads. 4.3.6+galaxy2 16.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis