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Repository minced
Name: minced
Owner: bgruening
Synopsis: MinCED - Mining CRISPRs in Environmental Datasets
MinCED is a program to find Clustered Regularly Interspaced Short Palindromic
Repeats (CRISPRs) in full genomes or environmental datasets such as metagenomes,
in which sequence size can be anywhere from 100 to 800 bp. MinCED runs from the
command-line and was derived from CRT (http://www.room220.com/crt/):
  Charles Bland et al., CRISPR Recognition Tool (CRT): a tool for automatic
  detection of clustered regularly interspaced palindromic repeats, BMC
  Bioinformatics 8, no. 1 (2007): 209.

https://github.com/ctSkennerton/minced

Repository-Maintainer: Björn Grüning 
Repository-Development: https://github.com/bgruening/galaxytools
Type: unrestricted
Revision: 2:e8cbdbc4de58
This revision can be installed: True
Times cloned / installed: 884
Dependencies of this repository

Repository package_minced_0_1_5 revision 00b3a01c21bc owned by iuc

Name Version Type
minced 0.1.5 package
MINCED_SCRIPT_PATH set_environment

Contents of this repository

Name Description Version Minimum Galaxy Version
(minced) 0.1.5 any

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis