Repository pindel
Name: pindel
Owner: portiahollyoak
Synopsis: Pindel detects genome-wide structural variation.
Pindel can detect breakpoints of large deletions, medium sized insertions, inversions, tandem duplications and other structural variants at single-based resolution from next-gen sequence data. It uses a pattern growth approach to identify the breakpoints of these variants from paired-end short reads.
Content homepage: http://artbio.fr
Development repository: https://github.com/portiahollyoak/Tools
Link to this repository: https://toolshed.g2.bx.psu.edu/view/portiahollyoak/pindel/374bb08157ca
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/portiahollyoak/pindel
Type: unrestricted
Revision: 1:374bb08157ca
This revision can be installed: True
Times cloned / installed: 359

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
0.2.5b8 any

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis