Repository optitype
Name: optitype
Owner: iuc
Synopsis: Precision HLA typing from NGS data
OptiType, is a novel HLA genotyping algorithm based on integer linear programming, capable of producing accurate 4-digit HLA genotyping predictions from NGS data by simultaneously selecting all minor and major HLA-I alleles.

https://github.com/FRED-2/OptiType
Content homepage: https://github.com/FRED-2/OptiType
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/optitype1
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/optitype/fd974c5df8bc
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/optitype
Type: unrestricted
Revision: 0:fd974c5df8bc
This revision can be installed: True
Times cloned / installed: 160

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
HLA genotyping predictions from NGS data 1.3.5+galaxy0 16.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis