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Repository snpeff_cds_report
Name: snpeff_cds_report
Owner: jjohnson
Synopsis: Get transcripts from Ensembl for snpEff variants and report coding changes
Get transcripts from Ensembl for snpEff variants and report protein coding changes for variants.
This is a specialized application tailored for a specific workflow.  
Link to this repository: https://toolshed.g2.bx.psu.edu/view/jjohnson/snpeff_cds_report/fbb6510186df
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/jjohnson/snpeff_cds_report
Type: unrestricted
Revision: 7:fbb6510186df
This revision can be installed: True
Times cloned / installed: 354

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Report Variant coding sequence changes for SnpEffects 1.2 any

Categories
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA