Repository geneseqtofamily
Name: geneseqtofamily
Owner: earlhaminst
Synopsis: Workflow based on the Ensembl GeneTrees pipeline to identify homologous genes and generate gene trees
This is a complex workflow, based on the Ensembl GeneTrees pipeline, which uses NCBI BLAST+, hcluster_sg, T-Coffee and TreeBeST to identify homologous genes and generate gene trees.

The output gene trees can be visualised using the Aequatus.js visualisation plugin.
Content homepage: https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily
Development repository: https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily
Link to this repository: https://toolshed.g2.bx.psu.edu/view/earlhaminst/geneseqtofamily/e732a731f778
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/earlhaminst/geneseqtofamily
Type: unrestricted
Revision: 7:e732a731f778
This revision can be installed: True
Times cloned / installed: 409

Categories
Phylogenetics - Tools for performing phylogenetic analysis