This repository has been marked as deprecated, so some tool shed features may be restricted.
Repository samtools_parallel_mpileup
Name: samtools_parallel_mpileup
Owner: yhoogstrate
Synopsis: samtools - optimized for parallel mpileup generation
not supported anymore, you can use sambamba instead
Development repository: https://github.com/ErasmusMC-Bioinformatics/samtools_parallel_mpileup_galaxy_wrapper
Link to this repository: https://toolshed.g2.bx.psu.edu/view/yhoogstrate/samtools_parallel_mpileup/460f0749aac5
Type: unrestricted
Revision: 0:460f0749aac5
This revision can be installed: True
Times cloned / installed: 98
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_ncurses_6_0 revision 0efde9889efd owned by iuc (prior install required)
Repository package_samtools_0_1_19 revision c9bd782f5342 owned by iuc

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
samtools 0.1.19 package
samtools_parallel_mpileup 0.1.19-a package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Samtools mpileup (supporting parallelization) 0.1.19-a.a any

Categories
SAM - Tools for manipulating alignments in the SAM format
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA