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Repository data_manager_build_kraken2_database
Owner: dfornika
Synopsis: Contains data managers that define and populate the kraken2_databases tool data table.
Kraken2 is a system for assigning taxonomic labels to short DNA
sequences, usually obtained through metagenomic studies. Previous attempts by other
bioinformatics software to accomplish this task have often used sequence alignment
or machine learning techniques that were quite slow, leading to the development
of less sensitive but much faster abundance estimation programs. Kraken aims to
achieve high sensitivity and high speed by utilizing exact alignments of k-mers
and a novel classification algorithm.
Type: unrestricted
Revision: 17:4c9f9d6098eb
This revision can be installed: True
Times cloned / installed: 77

Contents of this repository

Name Description Version Minimum Galaxy Version
database builder 2.0.8_beta 16.01

Name Version Data Tables
kraken2_build_database 1.0 kraken2_databases

Categories
Metagenomics - Tools enabling the study of metagenomes
Data Managers - Utilities for Managing Galaxy's built-in data cache