Repository gff3_rebase
Name: gff3_rebase
Owner: iuc
Synopsis: Rebase a GFF against a parent GFF (e.g. an original genome)
Often the genomic data processing/analysis process requires a workflow like the following:

-  select some features from a genome
-  export the sequences associated with those regions
-  analyse those exports with some tool like Blast

For display, especially in software like JBrowse, it is convenient to know
where in the original genome the analysis results would fall. E.g. if a
transmembrane domain is detected at bases 10-20 of an analysed protein, where
should this be displayed relative to the parent genome?

This tool helps fill that gap, by rebasing some analysis results against the
parent features which were originally analysed.
Type: unrestricted
Revision: 2:238981ed43b7
This revision can be installed: True
Times cloned / installed: 46

Contents of this repository

Name Description Version Minimum Galaxy Version
against parent features 1.2 16.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis