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Name: edger
Owner: iuc
Synopsis: Perform RNA-Seq differential expression analysis using edgeR pipeline
Apply edgeR pipeline on a table of tab separated count data to generate HTML report for differential expression analysis. Report includes BCV, MDS and smear plots as well as summarised table of statistics on each gene.
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/edger
Type: unrestricted
Revision: 6:555659de7321
This revision can be installed: True
Times cloned / installed: 2091

Contents of this repository

Name Description Version Minimum Galaxy Version
Perform differential expression of count data 3.24.1 16.01

Categories
Statistics - Tools for generating statistics
RNA - Utilities for RNA
Transcriptomics - Tools for use in the study of Transcriptomics.