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Repository stacks_cstacks
Owner: iuc
Synopsis: Stacks: cstacks (from the Stacks tool suite)
Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform.
Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography.

http://catchenlab.life.illinois.edu/stacks/
Type: unrestricted
Revision: 2:5bd1418f4227
This revision can be installed: True
Times cloned / installed: 262
Dependencies of this repository

Repository package_samtools_0_1_19 revision c9bd782f5342 owned by iuc (prior install required)
Repository package_velvet_1_2_10 revision 93d32326537b owned by devteam

Name Version Type
stacks 1.40 package
velvet 1.2.10 package

Contents of this repository

Name Description Version Minimum Galaxy Version
build a catalogue of loci 1.40.0 any

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis