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Repository khmer_normalize_by_median
Owner: iuc
Synopsis: Wrapper for khmer tool: khmer: Normalize By Median
khmer is a library and suite of command line tools for working with DNA
sequence. It is primarily aimed at short-read sequencing data such as that
produced by the Illumina platform. khmer takes a k-mer-centric approach to
sequence analysis, hence the name.

The official repository is at https://github.com/ged-lab/khmer
and you can read the docs online here: http://khmer.readthedocs.org/

There are two mailing lists dedicated to khmer, an announcements-only list
and a discussion list. To search their archives and sign-up for them, please
visit the following URLs:

Discussion http://lists.idyll.org/listinfo/khmer
Announcements http://lists.idyll.org/listinfo/khmer-announce
Content homepage: https://khmer.readthedocs.org/
Type: unrestricted
Revision: 7:557cc16931f4
This revision can be installed: True
Times cloned / installed: 785

Contents of this repository

Name Description Version Minimum Galaxy Version
Filter reads using digital normalization via k-mer abundances 3.0.0a3+galaxy1 16.01

Categories
Assembly - Tools for working with assemblies
Next Gen Mappers - Tools for the analysis and handling of Next Gen sequencing data