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Repository dexseq
Name: dexseq
Owner: iuc
Synopsis: Inference of differential exon usage in RNA-Seq
Estimate variance-mean dependence in count data from high-throughput sequencing assays and test for differential
expression based on a model using the negative binomial distribution
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/dexseq
Type: unrestricted
Revision: 6:9fd8b69e6e68
This revision can be installed: True
Times cloned / installed: 940

Contents of this repository

Name Description Version Minimum Galaxy Version
Determines differential exon usage from count tables 1.28.1+galaxy1 16.01
Prepare and count exon abundancies from RNA-seq data 1.28.1.0 16.01
Visualization of the per gene DEXSeq results 1.28.1.0 16.01

Categories
Transcriptomics - Tools for use in the study of Transcriptomics.
RNA - Utilities for RNA
Statistics - Tools for generating statistics