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Repository allele_counts
Owner: nick
Synopsis: Variant Annotator: count variants and calculate statistics
This tool parses variant counts from a type of VCF file produced by tools like the Naive Variant Detector. In addition to producing variant counts, the tool can filter by frequency, coverage, and strand bias, produce allele totals, and calculate minor allele frequencies.
Type: unrestricted
Revision: 8:411adeff1eec
This revision can be installed: True
Times cloned / installed: 570

Contents of this repository

Name Description Version Minimum Galaxy Version
process variant counts 1.2 any

Variant Analysis - Tools for single nucleotide polymorphism data such as WGA