| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/rnateam/pipmir/pipmir/0.1.0 (this tool) |
| pipmir |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| pipmir | 1.1 | package |
| ucsc-fatotwobit | 324 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
params|step_size: 10 refGenomeSource|genomeSource: history refGenomeSource|ownFile: test_seq.fa input_bam: Aligned.out.sam params|settingsType: custom |
putativeMatures: test_putativeMatures.bed predictedPrecursors: test_predictedPrecursors.txt predicted_miRNA: test_predicted_miRNAs.txt |
Aligned.out.sam test_seq.fa test_putativeMatures.bed test_predictedPrecursors.txt test_predicted_miRNAs.txt |