Repository revision
10:2344ed181ae6

Repository 'mothur_summary_single'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/mothur_summary_single

Summary.single tool metadata
Miscellaneous
Summary of calculator values for OTUs
mothur_summary_single
toolshed.g2.bx.psu.edu/repos/iuc/mothur_summary_single/mothur_summary_single/1.39.5.2
1.39.5.2
mothur "#help()" | sed '7q;d' | cut -d" " -f2
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/mothur_summary_single/mothur_summary_single/1.39.5.2 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/mothur_summary_single/mothur_summary_single/1.39.5.0
toolshed.g2.bx.psu.edu/repos/iuc/mothur_summary_single/mothur_summary_single/1.36.1.0
mothur_summary_single
Requirements (dependencies defined in the <requirements> tag set)
name version type
mothur 1.39.5 package
Functional tests
name inputs outputs required files
Test-1 otu: amazon.an.shared
subsample|use: yes
savelog: True
name: value
name: value
amazon.an.shared
value
Test-2 otu: amazon.an.shared
savelog: True
name: value
name: value
amazon.an.shared
value
Test-3 otu: amazon.an.shared
label: ['0.05', '0.22', '0.32']
calc: ['ace', 'bootstrap', 'chao', 'jack', 'sobs', 'simpsoneven', 'shannoneven', 'heip', 'smithwilson', 'bergerparker', 'coverage', 'goodscoverage', 'simpson', 'invsimpson', 'qstat', 'shannon', 'npshannon', 'boneh', 'efron', 'shen', 'solow', 'logseries', 'geometric', 'bstick', 'nseqs']
savelog: True
name: value
name: value
amazon.an.shared
value
Test-4 otu: amazon.an.shared
groupmode: False
savelog: True
name: value
amazon.an.shared
value
Test-5 otu: amazon.an.rabund
subsample|subsample: 10
subsample|iters: 42
subsample|use: yes
savelog: True
name: value
name: value
name: value
amazon.an.rabund
value