Repository revision
19:2f4eef1f0d22

Repository 'bcftools_plugin_missing2ref'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_missing2ref

bcftools missing2ref tool metadata
Miscellaneous
bcftools missing2ref
plugin Set missing genotypes
bcftools_plugin_missing2ref
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_missing2ref/bcftools_plugin_missing2ref/1.15.1+galaxy3
1.15.1+galaxy3
bcftools 2>&1 | grep 'Version:'
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_missing2ref/bcftools_plugin_missing2ref/1.15.1+galaxy3 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_missing2ref/bcftools_plugin_missing2ref/1.15.1+galaxy2
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_missing2ref/bcftools_plugin_missing2ref/1.15.1+galaxy1
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_missing2ref/bcftools_plugin_missing2ref/1.15.1+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_missing2ref/bcftools_plugin_missing2ref/1.10
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_missing2ref/bcftools_plugin_missing2ref/1.9+galaxy1
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_missing2ref/bcftools_plugin_missing2ref/1.9
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_missing2ref/bcftools_plugin_missing2ref/1.4.0
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_missing2ref/bcftools_plugin_missing2ref/1.3.1
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_missing2ref/bcftools_plugin_missing2ref/1.3.0
bcftools_plugin_missing2ref
Requirements (dependencies defined in the <requirements> tag set)
name version type
bcftools 1.15.1 package
htslib 1.15.1 package
Functional tests
name inputs outputs required files
Test-1 input_file: plugin1.vcf
output_type: v
 name: value
 plugin1.vcf
value