Repository revision
2:4934c0ac6197

Repository 'tbvcfreport'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/tbvcfreport

TB Variant Report tool metadata
Miscellaneous
- generate HTML report from SnpEff annotated M.tb VCF(s)
tbvcfreport
toolshed.g2.bx.psu.edu/repos/iuc/tbvcfreport/tbvcfreport/0.1.10+galaxy0
0.1.10+galaxy0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/tbvcfreport/tbvcfreport/1.0.0+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/tbvcfreport/tbvcfreport/0.1.10+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/tbvcfreport/tbvcfreport/0.1.8+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/tbvcfreport/tbvcfreport/0.1.7+galaxy0
tbvcfreport
Requirements (dependencies defined in the <requirements> tag set)
name version type
tbvcfreport 0.1.10 package
Functional tests
name inputs outputs required files
Test-1 input_vcf: rif_resistant.vcf
name: value
name: value
rif_resistant.vcf
value
Test-2 input_vcf: rif_resistant.vcf
tbprofiler_json: rif_resistant.results.json
name: value
name: value
name: value
name: value
rif_resistant.vcf
rif_resistant.results.json
value
Test-3 input_vcf: vcf_with_no_protein.vcf
name: value
name: value
vcf_with_no_protein.vcf
value