Repository revision
2:4a53856a5b85

Repository 'deeptools_bigwig_average'
hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_bigwig_average

bigwigAverage tool metadata
Miscellaneous
normalizes and average multiple bigWig files
deeptools_bigwig_average
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_bigwig_average/deeptools_bigwig_average/3.5.4+galaxy0
3.5.4+galaxy0
bigwigAverage --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_bigwig_average/deeptools_bigwig_average/3.5.4+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_bigwig_average/deeptools_bigwig_average/3.5.2+galaxy0
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_bigwig_average/deeptools_bigwig_average/3.5.1.0+galaxy0
deeptools_bigwig_average
Requirements (dependencies defined in the <requirements> tag set)
name version type
deeptools 3.5.4 package
samtools 1.9 package
Functional tests
name inputs outputs required files
Test-1 bigwigs: test.bw
outFileFormat: bigwig
advancedOpt|binSize: 5
advancedOpt|showAdvancedOpt: yes
name: value
test.bw
value
Test-2 bigwigs: test.bw
outFileFormat: bigwig
advancedOpt|binSize: 5
advancedOpt|scaleFactors: 0.5
advancedOpt|showAdvancedOpt: yes
name: value
test.bw
value
Test-3 bigwigs: ['test.bw', 'test_half.bw']
outFileFormat: bigwig
advancedOpt|binSize: 5
advancedOpt|scaleFactors: 0.5
advancedOpt|showAdvancedOpt: yes
name: value
test.bw
test_half.bw
value
Test-4 bigwigs: ['test.bw', 'test_half.bw']
outFileFormat: bigwig
advancedOpt|binSize: 5
advancedOpt|scaleFactors: 1:2
advancedOpt|showAdvancedOpt: yes
name: value
test.bw
test_half.bw
value