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Get overlapping reads tool metadata

Miscellaneous

Name: Get overlapping reads

Description:

Id: overlapping_reads

Guid: toolshed.g2.bx.psu.edu/repos/artbio/small_rna_signatures/overlapping_reads/3.4.2

Version: 3.4.2

Version command string: None

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/artbio/small_rna_signatures/overlapping_reads/3.4.2 (this tool)

toolshed.g2.bx.psu.edu/repos/artbio/small_rna_signatures/overlapping_reads/3.4.1

toolshed.g2.bx.psu.edu/repos/artbio/small_rna_signatures/overlapping_reads/3.3

toolshed.g2.bx.psu.edu/repos/artbio/small_rna_signatures/overlapping_reads/0.9.6

toolshed.g2.bx.psu.edu/repos/artbio/small_rna_signatures/overlapping_reads/0.9.5

toolshed.g2.bx.psu.edu/repos/artbio/small_rna_signatures/overlapping_reads/0.9.4

toolshed.g2.bx.psu.edu/repos/artbio/small_rna_signatures/overlapping_reads/0.9.3

toolshed.g2.bx.psu.edu/repos/artbio/small_rna_signatures/overlapping_reads/0.9.2

toolshed.g2.bx.psu.edu/repos/artbio/small_rna_signatures/overlapping_reads/0.9.1

toolshed.g2.bx.psu.edu/repos/artbio/small_rna_signatures/overlapping_reads/0.9.0

overlapping_reads

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

pysam

0.18.0

package

Functional tests

name

inputs

outputs

required files

Test-1

input: sr_bowtie.bam
minquery: 23
maxquery: 29
mintarget: 23
maxtarget: 29
overlap: 10

name: value

sr_bowtie.bam
value

Test-2

input: sr_bowtie.bam
minquery: 20
maxquery: 22
mintarget: 23
maxtarget: 29
overlap: 10

name: value

sr_bowtie.bam
value

Test-3

input: sr_bowtie.bam
minquery: 23
maxquery: 29
mintarget: 20
maxtarget: 22
overlap: 10

name: value

sr_bowtie.bam
value

Test-4

input: sr_bowtie.bam
minquery: 20
maxquery: 22
mintarget: 20
maxtarget: 22
overlap: 10

name: value

sr_bowtie.bam
value