Repository revision
0:53240d7c1fc5

Repository 'mesmer'
hg clone https://toolshed.g2.bx.psu.edu/repos/goeckslab/mesmer

Mesmer tool metadata
Miscellaneous
Mesmer
Mesmer for whole-cell segmentation of multiplexed tissue imaging data
mesmer
toolshed.g2.bx.psu.edu/repos/goeckslab/mesmer/mesmer/0.3.1+galaxy0
0.3.1+galaxy0
python /usr/src/app/run_app.py mesmer --help
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/goeckslab/mesmer/mesmer/0.3.1+galaxy1
toolshed.g2.bx.psu.edu/repos/goeckslab/mesmer/mesmer/0.3.1+galaxy0 (this tool)
mesmer
Requirements (dependencies defined in the <requirements> tag set)
No requirements defined
Functional tests
name inputs outputs required files
Test-1 nuclear_image: test.tiff
compartment: nuclear
squeeze: True
name: value
test.tiff
value