Repository revision
23:5bb148ee644a

Repository 'query_tabular'
hg clone https://toolshed.g2.bx.psu.edu/repos/jjohnson/query_tabular

Filter Tabular tool metadata
Miscellaneous
filter_tabular
toolshed.g2.bx.psu.edu/repos/jjohnson/query_tabular/filter_tabular/5.0.0
5.0.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/jjohnson/query_tabular/filter_tabular/5.0.0 (this tool)
toolshed.g2.bx.psu.edu/repos/jjohnson/query_tabular/filter_tabular/1.0.0
toolshed.g2.bx.psu.edu/repos/jjohnson/query_tabular/filter_tabular/5.0.0 (this tool)
filter_tabular
Requirements (dependencies defined in the <requirements> tag set)
No requirements defined
Functional tests
name inputs outputs required files
Test-1 linefilters_3|filter|regex_replace: 19\3-\2-\1
linefilters_0|filter|filter_type: regex
linefilters_2|filter|filter_type: select_columns
linefilters_3|filter|column: c4
linefilters_2|filter|columns: 7,2,3,4,1
linefilters_1|filter|filter_type: append_line_num
linefilters_3|filter|regex_pattern: (\d+)/(\d+)/(\d+)
linefilters_3|filter|filter_type: replace
input: pets.tsv
linefilters_0|filter|regex_action: include_find
linefilters_0|filter|regex_pattern: ^\d+
output: filtered_people_results.tsv
pets.tsv
filtered_people_results.tsv
Test-2 linefilters_5|filter|regex_action: exclude_match
linefilters_0|filter|filter_type: comment
linefilters_0|filter|comment_char: 35
linefilters_4|filter|columns: c2,c3
linefilters_2|filter|filter_type: append_line_num
linefilters_5|filter|filter_type: regex
linefilters_1|filter|regex_pattern: ^\d+
linefilters_3|filter|columns: c7,c5,c6
linefilters_4|filter|filter_type: normalize
linefilters_1|filter|filter_type: regex
linefilters_5|filter|regex_pattern: ^\d+\t\t
linefilters_4|filter|separator: ,
linefilters_3|filter|filter_type: select_columns
input: pets.tsv
linefilters_1|filter|regex_action: include_find
output: filtered_pets_results.tsv
pets.tsv
filtered_pets_results.tsv