| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_chicsignificantinteractions/hicexplorer_chicsignificantinteractions/3.7.2+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_chicsignificantinteractions/hicexplorer_chicsignificantinteractions/3.6+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_chicsignificantinteractions/hicexplorer_chicsignificantinteractions/3.6+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_chicsignificantinteractions/hicexplorer_chicsignificantinteractions/3.4.3.1 |
| toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_chicsignificantinteractions/hicexplorer_chicsignificantinteractions/3.4.3.0 |
| toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_chicsignificantinteractions/hicexplorer_chicsignificantinteractions/3.4.2.0 |
| toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_chicsignificantinteractions/hicexplorer_chicsignificantinteractions/3.4.1.0 |
| toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_chicsignificantinteractions/hicexplorer_chicsignificantinteractions/3.3.1.0 |
| hicexplorer_chicsignificantinteractions |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| hicexplorer | 3.7.2 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
interactionFile: cHi-C/chicViewpoint/two_matrices.hdf5 pvalue: 0.2 filter_conditional|loosePvalue: 0.5 filter_conditional|filter_selector: optionLoosePvalue backgroundModelFile: cHi-C/background.txt mode_selector: dual rangeUpstream: 200000 rangeDownstream: 200000 |
name: value name: value |
cHi-C/chicViewpoint/two_matrices.hdf5 cHi-C/background.txt value |