Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/iuc/circos/circos_interval_to_text/0.69.8+galaxy6 |
toolshed.g2.bx.psu.edu/repos/iuc/circos/circos_interval_to_text/0.69.8+galaxy5 (this tool) |
toolshed.g2.bx.psu.edu/repos/iuc/circos/circos_interval_to_text/0.69.8+galaxy4 |
toolshed.g2.bx.psu.edu/repos/iuc/circos/circos_interval_to_text/0.69.8+galaxy3 |
toolshed.g2.bx.psu.edu/repos/iuc/circos/circos_interval_to_text/0.69.8+galaxy2 |
toolshed.g2.bx.psu.edu/repos/iuc/circos/circos_interval_to_text/0.69.8+galaxy1 |
circos_interval_to_text |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
circos | 0.69.8 | package |
python | 2.7 | package |
bcbiogff | 0.6.4 | package |
biopython | 1.70 | package |
pybigwig | 0.3.13 | package |
circos-tools | 0.23 | package |
grep | 3.4 | package |
gawk | 5.1.0 | package |
tar | 1.29 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
ref|input: text/1.bed ref|ref_source: bed |
attributes: name |
text/1.bed name |
Test-2 |
ref|input: text/2.gff3 ref|attr: Name ref|ref_source: gff3 |
attributes: name |
text/2.gff3 name |