Repository revision
10:766d5f63b0f4

Repository 'kraken'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/kraken

Kraken tool metadata
Miscellaneous
Kraken
assign taxonomic labels to sequencing reads
kraken
toolshed.g2.bx.psu.edu/repos/devteam/kraken/kraken/1.3.1
1.3.1
export LC_ALL=C && kraken --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/devteam/kraken/kraken/1.3.1 (this tool)
toolshed.g2.bx.psu.edu/repos/devteam/kraken/kraken/1.3.0
toolshed.g2.bx.psu.edu/repos/devteam/kraken/kraken/1.2.4
toolshed.g2.bx.psu.edu/repos/devteam/kraken/kraken/1.2.3
toolshed.g2.bx.psu.edu/repos/devteam/kraken/kraken/1.2.1
toolshed.g2.bx.psu.edu/repos/devteam/kraken/kraken/1.2.0
toolshed.g2.bx.psu.edu/repos/devteam/kraken/kraken/1.1.2
toolshed.g2.bx.psu.edu/repos/devteam/kraken/kraken/1.1.1
toolshed.g2.bx.psu.edu/repos/devteam/kraken/kraken/1.1.0
kraken
Requirements (dependencies defined in the <requirements> tag set)
name version type
kraken 1.1.1 package
Functional tests
name inputs outputs required files
Test-1 single_paired|input_sequences: kraken/kraken_test1.fa
single_paired|single_paired_selector: no
split_reads: False
quick_operation|quick: no
kraken_database: old_style_test_entry
name: value
kraken/kraken_test1.fa
value
Test-2 single_paired|input_sequences: kraken/kraken_test1.fa
single_paired|single_paired_selector: no
split_reads: False
quick_operation|quick: no
kraken_database: new_style_test_entry
name: value
kraken/kraken_test1.fa
value